Windies brought in Stacy-Ann King and Karishma Ramharack for the second T20I.
The incident took place in the third ball of the sixth over by off-spinner Nida Dar.
What will be the playing XIs for Pakistan Women and Windies Women in the first T20I?
Malik is currently in South Africa leading his team in the five-match ODI series.
Australia Women and England Women have advanced to the final of the tournament.
While Australia will face Windies in the first semi-final, India and England will fight it out in the other knockout game on Friday.
Windies, South Africa, India and Australia are the four semi-finalists.
Windies Women skipper Stephanie Taylor was terrific with the ball and picked up a 4-wicket haul.
They are currently going through rigorous drills and intense batting sessions.
Against England, she had hit a brilliant 71 to help India Women post a huge total.